GitHub - apple/ml-simplefold
SimpleFold: Folding Proteins is Simpler than You Think
Introduction
We introduce SimpleFold, the first flow-matching based protein folding model that solely uses general purpose transformer layers. SimpleFold does not rely on expensive modules like triangle attention or pair representation biases, and is trained via a generative flow-matching objective. We scale SimpleFold to 3B parameters and train it on more than 8.6M distilled protein structures together with experimental PDB data. To the bes...
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